more handling of env vars

.gitignore

@@ -1,4 +1,3 @@
 config.py
-alembic.ini
 keys/*
 **.pyc

alembic.ini

@@ -0,0 +1,45 @@
+
+[alembic]
+script_location = alembic
+prepend_sys_path = .
+version_path_separator = os  # Use os.pathsep. Default configuration used for new projects.
+
+# Overwritten by env.py
+sqlalchemy.url = mysql+mysqldb://ergo:password@localhost/ergo_ext
+
+
+[post_write_hooks]
+
+[loggers]
+keys = root,sqlalchemy,alembic
+
+[handlers]
+keys = console
+
+[formatters]
+keys = generic
+
+[logger_root]
+level = WARN
+handlers = console
+qualname =
+
+[logger_sqlalchemy]
+level = WARN
+handlers =
+qualname = sqlalchemy.engine
+
+[logger_alembic]
+level = INFO
+handlers =
+qualname = alembic
+
+[handler_console]
+class = StreamHandler
+args = (sys.stderr,)
+level = NOTSET
+formatter = generic
+
+[formatter_generic]
+format = %(levelname)-5.5s [%(name)s] %(message)s
+datefmt = %H:%M:%S

alembic.ini.example

@@ -1,114 +0,0 @@
-# A generic, single database configuration.
-
-[alembic]
-# path to migration scripts
-script_location = alembic
-
-# template used to generate migration file names; The default value is %%(rev)s_%%(slug)s
-# Uncomment the line below if you want the files to be prepended with date and time
-# file_template = %%(year)d_%%(month).2d_%%(day).2d_%%(hour).2d%%(minute).2d-%%(rev)s_%%(slug)s
-
-# sys.path path, will be prepended to sys.path if present.
-# defaults to the current working directory.
-prepend_sys_path = .
-
-# timezone to use when rendering the date within the migration file
-# as well as the filename.
-# If specified, requires the python>=3.9 or backports.zoneinfo library.
-# Any required deps can installed by adding `alembic[tz]` to the pip requirements
-# string value is passed to ZoneInfo()
-# leave blank for localtime
-# timezone =
-
-# max length of characters to apply to the
-# "slug" field
-# truncate_slug_length = 40
-
-# set to 'true' to run the environment during
-# the 'revision' command, regardless of autogenerate
-# revision_environment = false
-
-# set to 'true' to allow .pyc and .pyo files without
-# a source .py file to be detected as revisions in the
-# versions/ directory
-# sourceless = false
-
-# version location specification; This defaults
-# to alembic/versions.  When using multiple version
-# directories, initial revisions must be specified with --version-path.
-# The path separator used here should be the separator specified by "version_path_separator" below.
-# version_locations = %(here)s/bar:%(here)s/bat:alembic/versions
-
-# version path separator; As mentioned above, this is the character used to split
-# version_locations. The default within new alembic.ini files is "os", which uses os.pathsep.
-# If this key is omitted entirely, it falls back to the legacy behavior of splitting on spaces and/or commas.
-# Valid values for version_path_separator are:
-#
-# version_path_separator = :
-# version_path_separator = ;
-# version_path_separator = space
-version_path_separator = os  # Use os.pathsep. Default configuration used for new projects.
-
-# set to 'true' to search source files recursively
-# in each "version_locations" directory
-# new in Alembic version 1.10
-# recursive_version_locations = false
-
-# the output encoding used when revision files
-# are written from script.py.mako
-# output_encoding = utf-8
-
-sqlalchemy.url = mysql+mysqldb://user:pass@localhost/dbname
-
-
-[post_write_hooks]
-# post_write_hooks defines scripts or Python functions that are run
-# on newly generated revision scripts.  See the documentation for further
-# detail and examples
-
-# format using "black" - use the console_scripts runner, against the "black" entrypoint
-# hooks = black
-# black.type = console_scripts
-# black.entrypoint = black
-# black.options = -l 79 REVISION_SCRIPT_FILENAME
-
-# lint with attempts to fix using "ruff" - use the exec runner, execute a binary
-# hooks = ruff
-# ruff.type = exec
-# ruff.executable = %(here)s/.venv/bin/ruff
-# ruff.options = --fix REVISION_SCRIPT_FILENAME
-
-# Logging configuration
-[loggers]
-keys = root,sqlalchemy,alembic
-
-[handlers]
-keys = console
-
-[formatters]
-keys = generic
-
-[logger_root]
-level = WARN
-handlers = console
-qualname =
-
-[logger_sqlalchemy]
-level = WARN
-handlers =
-qualname = sqlalchemy.engine
-
-[logger_alembic]
-level = INFO
-handlers =
-qualname = alembic
-
-[handler_console]
-class = StreamHandler
-args = (sys.stderr,)
-level = NOTSET
-formatter = generic
-
-[formatter_generic]
-format = %(levelname)-5.5s [%(name)s] %(message)s
-datefmt = %H:%M:%S

alembic/env.py

@@ -5,15 +5,18 @@ from sqlalchemy import pool
 
 from alembic import context
 
+import os
+
 # this is the Alembic Config object, which provides
 # access to the values within the .ini file in use.
 config = context.config
-
 # Interpret the config file for Python logging.
 # This line sets up loggers basically.
 if config.config_file_name is not None:
     fileConfig(config.config_file_name)
 
+config.set_main_option("sqlalchemy.url", os.getenv("DB_URI"))
+
 # add your model's MetaData object here
 # for 'autogenerate' support
 # from myapp import mymodel

cef_3M/sql.py

@@ -14,13 +14,13 @@ except:
     dburl = config.DBURL
 
 engine = create_engine(
-    alembic.get("alembic", "sqlalchemy.url"),
+    dburl,
     pool_pre_ping=True,
     pool_recycle=1800
 )
 
 ergoEngine = create_engine(
-    alembic.get("alembic", "sqlalchemy.url"),
+    dburl,
     pool_pre_ping=True,
     pool_recycle=1800
 )

run.sh

@@ -1,2 +1,3 @@
 #!/bin/sh
+alembic upgrade head
 uvicorn --reload main:app --port 8001